Information for 7-TTAAGGTTAAAA (Motif 9)

C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
Reverse Opposite:
G A C T G C A T A G C T C G A T G T C A G C T A G T A C G T A C A C G T G C A T C T G A G C T A
p-value:1e-17
log p-value:-4.129e+01
Information Content per bp:1.692
Number of Target Sequences with motif613.0
Percentage of Target Sequences with motif31.24%
Number of Background Sequences with motif9161.4
Percentage of Background Sequences with motif22.64%
Average Position of motif in Targets3302.6 +/- 3926.2bp
Average Position of motif in Background2519.7 +/- 2061.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAAGGTTAAAA-
TTAATGTTTAACC
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAAGGTTAAAA-----
TGATTGTTAACAGTTGG
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

NR2F2/MA1111.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAAGGTTAAAA
CAAAGGTCAAA-
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAAGGTTAAAA
TCAAGGTCATA-
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTAAGGTTAAAA-----
-AAAGGTCAAAAGGTCA
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAAGGTTAAAA
TCAAGGTCAT--
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTAAGGTTAAAA
--CGGTTTCAAA
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTAAGGTTAAAA------
--AAGGTCAAAAGGTCAA
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGGTTAAAA
NMMNBAAAGGGTTAA--
 A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAAGGTTAAAA
TCAAGGTCAN--
 C G A T G A C T C G T A T G C A C A T G C A T G C G A T C A G T G C T A C T G A C G T A C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T