Information for 23-TAACTTTATT (Motif 53)

A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T C G T A
p-value:1e-76
log p-value:-1.771e+02
Information Content per bp:1.530
Number of Target Sequences with motif1798.0
Percentage of Target Sequences with motif91.64%
Number of Background Sequences with motif1283.6
Percentage of Background Sequences with motif75.40%
Average Position of motif in Targets3093.0 +/- 3654.1bp
Average Position of motif in Background1869.8 +/- 2079.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)6.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAACTTTATT-----
NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAACTTTATT-
TAATTTAATTA
 A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAACTTTATT-
TAATTTAATTA
 A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAACTTTATT-
TAATTAAATTA
 A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAACTTTATT-----
TNAATTTTATTACCTN
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAACTTTATT-----
NNANTTTTATTGGNNN
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAACTTTATT------
NAATTTTATTACCNNN
 A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TAACTTTATT--
---TTTTATTGC
 A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAACTTTATT-
NTAATBNAATTA
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAACTTTATT-----
NNAATTTTATTGGNTN
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T