Information for 17-CGBCGATT (Motif 46)

G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T
Reverse Opposite:
C G T A G T C A C G A T G T A C A C T G T G A C T A G C C T A G
p-value:1e-85
log p-value:-1.963e+02
Information Content per bp:1.696
Number of Target Sequences with motif1499.0
Percentage of Target Sequences with motif76.40%
Number of Background Sequences with motif937.0
Percentage of Background Sequences with motif55.04%
Average Position of motif in Targets3482.8 +/- 3453.6bp
Average Position of motif in Background1970.4 +/- 1805.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CGBCGATT--
CNGTGATTTN
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CGBCGATT---
TTGCCCGGATTAGG
 A C G T A C G T A C G T G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGBCGATT--
--CGGATTAN
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGBCGATT-
GCAGTGATTT
 A C G T G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGBCGATT---
-GNGGATTAGN
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGBCGATT-
TGCTGTGATTT
 A C G T A C G T G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGBCGATT--
--RGGATTAR
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGBCGATT--
-ACCGATTAG
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGBCGATT---
-NNGGATTAGN
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGBCGATT--
--NGGATTAA
 G A T C A T C G A C T G T G A C A C T G C G T A C A G T G C A T A C G T A C G T
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A