Information for 9-GCGAAAAATA (Motif 25)

A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A
Reverse Opposite:
A C G T C T G A C G A T C G A T A G C T G C A T C A G T A G T C A T C G A T G C
p-value:1e-101
log p-value:-2.346e+02
Information Content per bp:1.809
Number of Target Sequences with motif1456.0
Percentage of Target Sequences with motif74.21%
Number of Background Sequences with motif859.8
Percentage of Background Sequences with motif50.50%
Average Position of motif in Targets3499.4 +/- 3718.8bp
Average Position of motif in Background1966.8 +/- 2025.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCGAAAAATA--
GCTAAAAATAGC
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCGAAAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGAAAAATA--
DCYAAAAATAGM
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCGAAAAATA
TTCGCGCGAAAA---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGAAAAATA--
KCCAAAAATAGC
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGAAAAATA--
TCTAAAAATAGA
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGAAAAATA---
AGCCGAAAAAAAAAT
 A C G T A C G T A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCGAAAAATA--
GCTATAAATAGC
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGAAAAATA--
ACTATAAATAGA
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGAAAAATA-
-CCAAAAATAG
 A T C G A T G C A C T G G T C A C G T A C T G A G C T A C G T A A G C T T C G A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G