Information for 6-GCATACTGAA (Motif 7)

A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G A C G T C G T A A G C T A C T G A G T C
p-value:1e-117
log p-value:-2.715e+02
Information Content per bp:1.960
Number of Target Sequences with motif1762.0
Percentage of Target Sequences with motif89.81%
Number of Background Sequences with motif1171.9
Percentage of Background Sequences with motif67.67%
Average Position of motif in Targets3481.0 +/- 4049.6bp
Average Position of motif in Background1997.4 +/- 2070.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.65
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F2/MA0683.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCATACTGAA----
ATGCATAATTAATGAG
 A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCATACTGAA--
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCATACTGAA----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GCATACTGAA
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATACTGAA--
ATGAATAATTAATG
 A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATACTGAA----
ATGCATAATTAATGAG
 A C G T A C G T A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POL002.1_INR/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCATACTGAA
-NNNANTGA-
 A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCATACTGAA--
HDGYAATGAAAN
 A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCATACTGAA-
-GGYAATGAAA
 A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCATACTGAA----
----ACTGAAACCA
 A C T G G T A C C T G A A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A