Information for 4-TCGAGTCGTA (Motif 6)

A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A
Reverse Opposite:
G A C T G T C A T G A C A T C G C T G A T A G C G A C T G A T C T A C G T G C A
p-value:1e-123
log p-value:-2.846e+02
Information Content per bp:1.467
Number of Target Sequences with motif1530.0
Percentage of Target Sequences with motif77.98%
Number of Background Sequences with motif902.6
Percentage of Background Sequences with motif52.12%
Average Position of motif in Targets3639.6 +/- 3808.0bp
Average Position of motif in Background2020.9 +/- 1863.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGTCGTA
NTCAAGTGG--
 A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCGAGTCGTA--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAGTCGTA----
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCGAGTCGTA
CTYRAGTGSY-
 A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGAGTCGTA
BTBRAGTGSN-
 A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCGAGTCGTA-------
TAAGGTCGTAAAATCCT
 A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCGAGTCGTA-------
TTAGGTCGTAAAATTTC
 A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCGAGTCGTA
TTRAGTGSYK
 A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCGAGTCGTA-------
CAAGGTCGTAAAATCTT
 A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCGAGTCGTA--
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G C T G A A T C G G A C T T A G C A C T G C A G T C T G A A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A