Information for 21-GCCCTTGGCT (Motif 48)

A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A C G T A C T A G A C T G A C T G A G T C
p-value:1e-75
log p-value:-1.734e+02
Information Content per bp:1.961
Number of Target Sequences with motif1921.0
Percentage of Target Sequences with motif97.91%
Number of Background Sequences with motif1489.1
Percentage of Background Sequences with motif85.98%
Average Position of motif in Targets4038.3 +/- 4528.2bp
Average Position of motif in Background2047.5 +/- 1845.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)5.96
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGCT
TGACCTTGAN-
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGCT
NGCCTNAGGCN
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGCT
TGCCTGAGGCN
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCCTTGGCT--
---NTTGGCANN
 A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGCT
TGACCTTGAV-
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCCTTGGCT
CGCCTCAGGCA
 A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCCTTGGCT--
-TACTTGGCAGA
 A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGGCT
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCCCTTGGCT-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCCTTGGCT
CCGATTGGCT
 A C T G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T