Information for 13-AAGTTACG (Motif 35)

C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A C G T A A G T C A C G T A C G T
p-value:1e-91
log p-value:-2.107e+02
Information Content per bp:1.530
Number of Target Sequences with motif1306.0
Percentage of Target Sequences with motif66.56%
Number of Background Sequences with motif757.9
Percentage of Background Sequences with motif43.76%
Average Position of motif in Targets3326.2 +/- 3547.4bp
Average Position of motif in Background2004.3 +/- 2102.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.95
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGTTACG
ACTAGTTAAC
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGTTACG--
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

GMEB2/MA0862.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGTTACG---
---TTACGTAA
 C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGTTACG--
--ATGACGTA
 C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGTTACG
AAAAGTCAA-
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTACG------
NTGGTTTCGGTTNNN
 A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

SIX1/MA1118.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTACG
TATCAGGTTAC-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTACG------
TNAGTTTCGATTTTN
 A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAGTTACG
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTACG-----
TNTGGTTTCGATACN
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G