Information for 12-TTTTGCGT (Motif 34)

A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C C G T A C G T A C G T A C G T A
p-value:1e-92
log p-value:-2.119e+02
Information Content per bp:1.530
Number of Target Sequences with motif1640.0
Percentage of Target Sequences with motif83.59%
Number of Background Sequences with motif1084.9
Percentage of Background Sequences with motif62.64%
Average Position of motif in Targets3476.9 +/- 3711.6bp
Average Position of motif in Background2005.0 +/- 1985.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.87
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTTTGCGT----
--TTGCGTGCVA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCGT--
NATTTGCATNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

PB0075.1_Sp100_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCGT-----
ATTTTCCGNNAAAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCGT----
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCGT--
TTCATTTGCATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTTTGCGT-
---TGCGTG
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTGCGT--
ATTTGCATAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTTGCGT--
ATTTGCATAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTGCGT-
ATTTTCCATT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCGT---
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G