Information for 18-CCCCGATGGAGA (Motif 28)

A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
Reverse Opposite:
A C G T A T G C A G C T A T G C G A T C G T C A A C G T A T G C A C T G A T C G T A C G T A C G
p-value:1e-99
log p-value:-2.288e+02
Information Content per bp:1.510
Number of Target Sequences with motif1433.0
Percentage of Target Sequences with motif73.04%
Number of Background Sequences with motif857.3
Percentage of Background Sequences with motif49.51%
Average Position of motif in Targets3929.5 +/- 3851.6bp
Average Position of motif in Background2094.7 +/- 1826.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCCGATGGAGA
CACCCCCGGGGGGG-
 A C G T A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCCGATGGAGA
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCCGATGGAGA
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGATGGAGA
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCCGATGGAGA
GTCCCCAGGGGA--
 A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGATGGAGA--
DCHCAGCAGGRGGCC
 A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCCGATGGAGA
NGTCCCNNGGGA--
 A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGATGGAGA
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGATGGAGA-
DBTCCCHWGGGAVTN
 A C G T A C G T A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A A C G T
C G T A A C G T A G C T A G T C G A T C G A T C G A C T C G T A C T A G C T A G T C A G T C G A T G A C G A C T C G A T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCCGATGGAGA---
CTCCCTGGGAGGCCN
 A T G C A T G C T A G C T G A C T A C G T G C A C A G T C T A G T A C G T C G A T A C G T G C A A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T