Information for 4-TCTACGGC (Motif 11)

A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C G T C G T A A C T G C G T A
p-value:1e-114
log p-value:-2.629e+02
Information Content per bp:1.530
Number of Target Sequences with motif1458.0
Percentage of Target Sequences with motif74.31%
Number of Background Sequences with motif850.4
Percentage of Background Sequences with motif49.11%
Average Position of motif in Targets3708.9 +/- 4087.5bp
Average Position of motif in Background1986.8 +/- 1852.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACGGC----
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGGC----
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGGC----
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACGGC----
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACGGC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTACGGC-
NTTTTACGACC
 A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTACGGC----
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTACGGC-
NTTTTACGACT
 A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTACGGC-
DGWTTTATGRCN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTACGGC-
NTTTTACGACC
 A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C