Information for 22-GTTGATCG (Motif 50)

A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A G T C C G T A C G T A A G T C
p-value:1e-62
log p-value:-1.438e+02
Information Content per bp:1.530
Number of Target Sequences with motif1076.0
Percentage of Target Sequences with motif54.84%
Number of Background Sequences with motif623.4
Percentage of Background Sequences with motif36.23%
Average Position of motif in Targets3516.2 +/- 3810.4bp
Average Position of motif in Background1902.9 +/- 1732.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTGATCG-
-TTGATTGN
 A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTTGATCG-----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTGATCG--
GTTAATGGCC
 A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

PH0016.1_Cux1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTTGATCG-----
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGATCG--
TTTNATTGCY
 A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGATCG--
ATTGATTYND
 A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTTGATCG
NTATYGATCH
 A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGATCG----
TTTGATTGATGN
 A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GTTGATCG---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGATCG----
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A