Information for 18-AAAAACAATC (Motif 42)

C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
p-value:1e-85
log p-value:-1.970e+02
Information Content per bp:1.530
Number of Target Sequences with motif1889.0
Percentage of Target Sequences with motif96.28%
Number of Background Sequences with motif1405.3
Percentage of Background Sequences with motif81.67%
Average Position of motif in Targets3370.8 +/- 3845.3bp
Average Position of motif in Background1887.9 +/- 2026.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)7.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:AAAAACAATC
--NAACAAT-
 C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAAAACAATC
GTAAACAAT-
 C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACAATC
AAACAAACATTC
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:AAAAACAATC
---AACAAT-
 C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAAAACAATC--------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAAAACAATC
AATAAACAATN
 A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AAAAACAATC-
NTTNAGAACAATTA
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAAAACAATC---
NNTNANAACAATTNNA
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAAACAATC-
AACAAACAACAAGAG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACAATC-----
TNNAGAACAATANATNN
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C