Information for 19-GAGGGGTATTTT (Motif 33)

C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T
Reverse Opposite:
G T C A T C G A T G C A C G T A G A C T C T G A G A T C G T A C G A T C G A T C G C A T G A T C
p-value:1e-97
log p-value:-2.249e+02
Information Content per bp:1.510
Number of Target Sequences with motif1494.0
Percentage of Target Sequences with motif76.15%
Number of Background Sequences with motif914.1
Percentage of Background Sequences with motif53.13%
Average Position of motif in Targets3614.0 +/- 3976.6bp
Average Position of motif in Background1912.8 +/- 2016.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGGGGTATTTT----
----KCTATTTTTRGH
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGGGGTATTTT------
---TTCTATTTTTAGNNN
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGGGGTATTTT----
----GCTATTTTTAGC
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

RELB/MA1117.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGGGTATTTT
NNGGGGAATNC-
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGGGGTATTTT
-AAGGATATNTN
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ZNF384/MA1125.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAGGGGTATTTT----
----TTTTTTTTTANN
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGGGGTATTTT
-----GTTTGTT
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGTATTTT
GGAGGGGGAA---
 A C G T C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGGGGTATTTT-
---GGGAATTTCC
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGGGGTATTTT-----
NNNNTTTTTTTTTNAAC
 C T A G C G T A C T A G C T A G C A T G C T A G G A C T C T G A G C A T A C G T A G C T C A G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C