Information for 6-ATTAATCT (Motif 23)

C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
G T C A A C T G C G T A A C G T A C G T C G T A C G T A A C G T
p-value:1e-103
log p-value:-2.395e+02
Information Content per bp:1.963
Number of Target Sequences with motif1616.0
Percentage of Target Sequences with motif82.36%
Number of Background Sequences with motif1025.9
Percentage of Background Sequences with motif59.62%
Average Position of motif in Targets3180.4 +/- 3585.7bp
Average Position of motif in Background1884.0 +/- 2012.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.70
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATCT
NTAATTAATAT
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATCT-----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ATTAATCT-
-TTAATCCT
 C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--ATTAATCT
TCATCAATCA
 A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATCT-----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATCT-----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:ATTAATCT-
-YTAATCCY
 C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATCT
RGCCATYAATCA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATTAATCT-
-TTAATCCG
 C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATTAATCT-
-TTAATCCC
 C G T A A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C