Information for 10-AAGTTCGGAG (Motif 31)

C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C T G C G T A C G T A A G T C C G A T C G A T
p-value:1e-94
log p-value:-2.173e+02
Information Content per bp:1.864
Number of Target Sequences with motif1535.0
Percentage of Target Sequences with motif78.24%
Number of Background Sequences with motif962.6
Percentage of Background Sequences with motif55.94%
Average Position of motif in Targets3532.5 +/- 3995.7bp
Average Position of motif in Background2053.3 +/- 2002.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAGTTCGGAG------
AAGATCGGAANTNNNA
 C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCGGAG
TGAGTTCA---
 A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTCGGAG
CAAAGKTCAA--
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGTTCGGAG-
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

NR4A1/MA1112.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGTTCGGAG
AAAAGGTCAC--
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
C G T A C T G A C G T A G T C A A T C G T C A G A G C T G T A C C T G A G T A C A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGTTCGGAG
CAAAGGTCAAA-
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAGTTCGGAG-
-----CGGAGC
 C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGTTCGGAG
CAAAGGTCAG--
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

TCF7L1/MA1421.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCGGAG-
AAAGATCAAAGG
 A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G A C G T
G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGTTCGGAG-
AAAGATCAAAGG
 A C G T C G T A C G T A A C T G A C G T A C G T A G T C C T A G A C T G G T C A C T A G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G