Information for 2-CAGCTGCC (Motif 3)

A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
Reverse Opposite:
A C T G C A T G A G T C C G T A A C T G A G T C A C G T A C T G
p-value:1e-133
log p-value:-3.071e+02
Information Content per bp:1.906
Number of Target Sequences with motif1615.0
Percentage of Target Sequences with motif82.31%
Number of Background Sequences with motif965.4
Percentage of Background Sequences with motif56.10%
Average Position of motif in Targets3890.5 +/- 4201.5bp
Average Position of motif in Background2277.0 +/- 2080.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCC
NNACAGCTGC-
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCC
NNGCAGCTGTC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCC--
AGCAGCTGCTNN
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCC
CAGCAGCTGN-
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

ASCL1/MA1100.1/Jaspar

Match Rank:5
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCC--
NNCCAGCTGCTNN
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C A C G T A C G T
A T G C T A C G T A G C T A G C T G C A A T C G T A G C G C A T A T C G A G T C G A C T A T C G A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCC
AGCAGCTGCT
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCC---
TGCAGCTGTCCCT
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCC
NAHCAGCTGD-
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCC
NNGCAGCTGTT
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTGCC----
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G G T A C G T A C A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G