Information for 15-CCCATTGGGCTC (Motif 29)

A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T A C T G A C T G A C T G
p-value:1e-96
log p-value:-2.231e+02
Information Content per bp:1.530
Number of Target Sequences with motif1852.0
Percentage of Target Sequences with motif94.39%
Number of Background Sequences with motif1326.4
Percentage of Background Sequences with motif77.07%
Average Position of motif in Targets3981.1 +/- 4593.3bp
Average Position of motif in Background2106.6 +/- 1928.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)4.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCATTGGGCTC
CCGATTGGCT--
 A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCCATTGGGCTC-
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCATTGGGCTC-
CCCCCTTGGGCCCC
 A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCATTGGGCTC
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCATTGGGCTC----
NNNNTTGGGCACNNCN
 A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCATTGGGCTC
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCATTGGGCTC
TGCCCTGAGGGCA-
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCATTGGGCTC
NCCATTGTTC--
 A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCATTGGGCTC
-CCATTGTTYB-
 A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCATTGGGCTC
NTGCCCTTGGGCGN
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G