Information for 12-GCGTGGGTTTCC (Motif 24)

A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C C G T A A G T C A C T G A G T C
p-value:1e-99
log p-value:-2.288e+02
Information Content per bp:1.530
Number of Target Sequences with motif1863.0
Percentage of Target Sequences with motif94.95%
Number of Background Sequences with motif1337.5
Percentage of Background Sequences with motif77.72%
Average Position of motif in Targets3786.0 +/- 4154.4bp
Average Position of motif in Background2209.4 +/- 2017.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)4.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGTGGGTTTCC
--GGGGATTTCC
 A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCGTGGGTTTCC
--GGGAATTTCC
 A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCGTGGGTTTCC
--GGGGATTTCC
 A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGTGGGTTTCC
TGCGTGGGYG---
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGGGTTTCC
TGCGTGGGCGT--
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGTGGGTTTCC
TGCGTG-------
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTGGGTTTCC
NGCGTGGGCGGR-
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCGTGGGTTTCC
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

EGR1/MA0162.3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGGGTTTCC
ANTGCGTGGGCGTN-
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C
C G T A C G T A G A C T C T A G G T A C C T A G A C G T C T A G C T A G A C T G A G T C C A T G C A G T C G T A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGTGGGTTTCC-
-NGGGGATTTCCC
 A C T G A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C