Information for 6-TCGCGCTGGGAG (Motif 8)

A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G
Reverse Opposite:
T G A C A C G T A T G C T A G C A T G C T C G A A T C G T A G C T A C G T G A C T A C G T C G A
p-value:1e-110
log p-value:-2.553e+02
Information Content per bp:1.707
Number of Target Sequences with motif1478.0
Percentage of Target Sequences with motif75.33%
Number of Background Sequences with motif867.0
Percentage of Background Sequences with motif50.66%
Average Position of motif in Targets3750.1 +/- 3689.7bp
Average Position of motif in Background2223.6 +/- 1859.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCGCGCTGGGAG----
-CTCCCTGGGAGGCCN
 A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T A C G T A C G T A C G T
A C G T T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGCTGGGAG-
TCNCCTGCTGNGNNN
 A C G T A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCGCGCTGGGAG-
GCCGCGCAGTGCGT
 A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGCTGGGAG-
TNTCCTGCTGTGNNG
 A C G T A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCGCGCTGGGAG
-CCTGCTGAGH-
 A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCGCGCTGGGAG-
NNTCCTGCTGTGNNN
 A C G T A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCGCGCTGGGAG
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCGCGCTGGGAG
---VGCTGGCA-
 A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G
A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCGCGCTGGGAG--
----CCTGGGAAAG
 A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCGCGCTGGGAG-
CACCCCCGGGGGGG
 A C G T A G C T A T G C A C T G A T G C A T C G T A G C A G C T T A C G A T C G T A C G G T C A A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G