Information for 24-TCGACTAG (Motif 55)

A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C G T A G T C A C T G C G T A
p-value:1e-60
log p-value:-1.392e+02
Information Content per bp:1.530
Number of Target Sequences with motif1031.0
Percentage of Target Sequences with motif52.55%
Number of Background Sequences with motif588.6
Percentage of Background Sequences with motif34.39%
Average Position of motif in Targets3385.0 +/- 3528.0bp
Average Position of motif in Background2110.3 +/- 2151.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCGACTAG
ACCGATTAG
 A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGACTAG-
-TGTCTAGA
 A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G A C G T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGACTAG---
-CGTCTAGACA
 A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCGACTAG
TTATCGATTA-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCGACTAG
TAATCGATTA-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCGACTAG
NTATCGATTA-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCGACTAG-----
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PAX3/MA0780.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCGACTAG
TAATCGATTA-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G
C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCGACTAG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCGACTAG-
TTGCCCGGATTAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C T G A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G