Information for 2-CTTGAGGCGGCC (Motif 2)

T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
Reverse Opposite:
A C T G A C T G A G T C A G T C A T C G T A G C G T A C G C A T T G A C T G C A G T C A A T C G
p-value:1e-130
log p-value:-2.997e+02
Information Content per bp:1.705
Number of Target Sequences with motif1630.0
Percentage of Target Sequences with motif83.08%
Number of Background Sequences with motif982.6
Percentage of Background Sequences with motif57.42%
Average Position of motif in Targets3929.5 +/- 4503.1bp
Average Position of motif in Background2173.3 +/- 1851.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCGGCC
NGCCTGAGGCN---
 A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCGGCC
NGCCTNAGGCN---
 A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCGGCC--
NNTNAGGGGCGGNNNN
 A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGGCGGCC
TGCCTGAGGCN---
 A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTGAGGCGGCC----
NNNGGGGCGCCCCCNN
 T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTTGAGGCGGCC-
-----GGCGCGCT
 T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTTGAGGCGGCC
ATGCCCTGAGGC----
 A C G T A C G T A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

CTCFL/MA1102.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTGAGGCGGCC--
CACCAGGGGGCACC
 T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C A C G T A C G T
T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAGGCGGCC
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C G T T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTGAGGCGGCC
HAWGRGGCCM--
 T A G C C A G T A C G T A C T G C G T A C A T G A T C G T A G C T C A G T A C G T G A C T A G C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T