Information for 11-CTCAGCCAGT (Motif 29)

A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G
p-value:1e-94
log p-value:-2.183e+02
Information Content per bp:1.965
Number of Target Sequences with motif1631.0
Percentage of Target Sequences with motif83.13%
Number of Background Sequences with motif1058.7
Percentage of Background Sequences with motif61.72%
Average Position of motif in Targets3895.6 +/- 4510.0bp
Average Position of motif in Background2080.3 +/- 1933.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCAGCCAGT--
ACTAGCCAATCA
 A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCAGT
DCTCAGCAGG-
 A C G T A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCAGT-----
NNNNTGCCAGTGATTG
 A C G T A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAGCCAGT
-BCAGACWA-
 A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCAGCCAGT
--CAGCC---
 A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCAGCCAGT-
GTCAGCANNTN
 A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

GRHL2/MA1105.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCAGCCAGT----
GACAAACCAGTTTTT
 A C G T A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T A G G T C A T G A C G C T A C T G A C G T A T A G C G T A C C G T A A T C G G A C T G A C T G A C T C A G T C A G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCAGT-
NGTCAGCANTTT
 A C G T A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-10
Orientation:forward strand
Alignment:----------CTCAGCCAGT
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCAGCCAGT---
---AGCCAATCGG
 A G T C A C G T G T A C G T C A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G