Information for 25-TTTCAAGCATGA (Motif 51)

C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
Reverse Opposite:
C G A T G A T C G C T A C G A T A C T G A T G C A G C T C A G T A T C G G C T A G T C A G C T A
p-value:1e-89
log p-value:-2.069e+02
Information Content per bp:1.712
Number of Target Sequences with motif1377.0
Percentage of Target Sequences with motif70.18%
Number of Background Sequences with motif832.3
Percentage of Background Sequences with motif47.68%
Average Position of motif in Targets3179.3 +/- 3475.1bp
Average Position of motif in Background1950.4 +/- 2144.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTTCAAGCATGA---
-TTCACGCATGAGTT
 C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTCAAGCATGA
CGGTTTCAAA-----
 A C G T A C G T A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAAGCATGA
TTTCCCAGAAN--
 A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAAGCATGA--
NGCANTCATGCGTGACG
 A C G T A C G T A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAAGCATGA
TGGTTTCAGT-----
 A C G T A C G T A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTCAAGCATGA
---CAAGCTT--
 C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTTCAAGCATGA-----
CGTCACGCATGACTGCA
 C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTTCAAGCATGA-
-------CATGAC
 C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PBX2/MA1113.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAAGCATGA
NCTGTCAATCAN--
 A C G T A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTCAAGCATGA
ATTTGAATT----
 A C G T C G A T A C G T C G A T A T G C G T C A T C G A T A C G T G A C G C T A C G A T C T A G C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T