Information for 17-CTGCAAAGGC (Motif 50)

A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A C T G
p-value:1e-91
log p-value:-2.108e+02
Information Content per bp:1.530
Number of Target Sequences with motif1916.0
Percentage of Target Sequences with motif97.66%
Number of Background Sequences with motif1459.3
Percentage of Background Sequences with motif83.60%
Average Position of motif in Targets3868.0 +/- 4372.7bp
Average Position of motif in Background2117.4 +/- 2186.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)5.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGGC
ACWTCAAAGG-
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGGC
ACATCAAAGG-
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAAAGGC
NNTGCCAAGNN
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAAAGGC
ASATCAAAGG-
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGCAAAGGC
ATATGCAAATT-
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAAGGC-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAAGGC-
ATATGCAAATNNN
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAAGGC--
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCAAAGGC
-AACAAAGG-
 A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGGC
GGTGCCAAGT-
 A C G T A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T