Information for 6-GCCGGCCACTCA (Motif 12)

A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A
Reverse Opposite:
A C G T A T C G C G T A T A C G A G C T A T C G T A C G T A G C T A G C A C T G A T C G T A G C
p-value:1e-122
log p-value:-2.820e+02
Information Content per bp:1.700
Number of Target Sequences with motif1552.0
Percentage of Target Sequences with motif79.10%
Number of Background Sequences with motif934.2
Percentage of Background Sequences with motif53.52%
Average Position of motif in Targets3833.3 +/- 3966.0bp
Average Position of motif in Background2150.2 +/- 1831.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.49
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX3/MA1114.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGCCACTCA---
NNNCCTGTCACTCANNN
 A C G T A C G T A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCGGCCACTCA
GSCTGTCACTCA
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCCGGCCACTCA--
---AGCCACTCAAG
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCGGCCACTCA-
-SCTGTCAVTCAV
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCGGCCACTCA-
-NCTGTCAATCAN
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCGGCCACTCA--
TCCGCCCCCGCATT
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCGGCCACTCA-
---AASCACTCAA
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCGGCCACTCA--
--RGGGCACTAACY
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A A C G T A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCGGCCACTCA
-ACGCCCACGCA
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCGGCCACTCA
YCCGCCCACGCN
 A T C G T A G C T G A C A T C G A T C G A T G C A T G C T C G A A T G C G A C T T A G C G T C A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A