Information for 2-CTGAAAGCAA (Motif 9)

A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T A G C T A C G T A G T C C T G A A C T G
p-value:1e-120
log p-value:-2.774e+02
Information Content per bp:1.953
Number of Target Sequences with motif1222.0
Percentage of Target Sequences with motif62.28%
Number of Background Sequences with motif633.2
Percentage of Background Sequences with motif36.21%
Average Position of motif in Targets3652.5 +/- 4193.8bp
Average Position of motif in Background2143.2 +/- 2042.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGCAA
ACTGAAACCA-
 A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGCAA-------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGAAAGCAA
TTGACAGC--
 A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAAGCAA-------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGAAAGCAA
GGTGYTGACAGS--
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

PRDM1/MA0508.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGAAAGCAA
GTGAAAGTGA
 A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A

IRF5/MA1420.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGAAAGCAA----
CCGAAACCGAAACT
 A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGAAAGCAA
VGCTGWCAVB--
 A C G T A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGAAAGCAA---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAAGCAA---
NTTNAGAACAATTA
 A C G T A G T C A G C T A C T G C G T A C T G A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A