Information for 15-TTTGGGCTTT (Motif 36)

A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A A C T G A G T C A G T C A G T C C G T A C G T A C G T A
p-value:1e-86
log p-value:-1.985e+02
Information Content per bp:1.988
Number of Target Sequences with motif1893.0
Percentage of Target Sequences with motif96.48%
Number of Background Sequences with motif1410.3
Percentage of Background Sequences with motif81.95%
Average Position of motif in Targets3613.8 +/- 4084.8bp
Average Position of motif in Background2053.9 +/- 2059.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)5.70
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGGCTTT----
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TCF7L1/MA1421.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGGCTTT
CCTTTGATCTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTGGGCTTT
TTTGCGGTTT
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGGCTTT
CCTTTGATCTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTGGGCTTT-------
--TGGACTTTGNNCTCN
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGGGCTTT--------
--TGGACTTTGNNCTNTG
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGGGCTTT
AACCCTTTGATCTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTGGGCTTT-
-TTGAMCTTTG
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGGCTTT---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTGGGCTTT--
--GGGGATTTCC
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C