Information for 18-ACGTAAAATGAA (Motif 32)

C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T
p-value:1e-87
log p-value:-2.020e+02
Information Content per bp:1.530
Number of Target Sequences with motif1766.0
Percentage of Target Sequences with motif90.01%
Number of Background Sequences with motif1232.1
Percentage of Background Sequences with motif71.60%
Average Position of motif in Targets3360.8 +/- 3964.8bp
Average Position of motif in Background2002.9 +/- 2234.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)5.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAATGAA
TTACGTAA------
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAATGAA
GGTCGTAAAAA---
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACGTAAAATGAA--
--GWAAYHTGABMC
 C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACGTAAAATGAA
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAATGAA
GGTCGTAAAAT---
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAATGAA
AGTCGTAAAAA---
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACGTAAAATGAA
AAACCTCGTAAAATTT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGTAAAATGAA
GTCGTAAAAA---
 A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAATGAA
GCTCGTAAAAA---
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACGTAAAATGAA
GAGTGTACGTAAGATGG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G A C G T