Information for 17-GGCCAAGTTCGG (Motif 31)

A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C T G A G T C A G T C
p-value:1e-87
log p-value:-2.022e+02
Information Content per bp:1.530
Number of Target Sequences with motif1814.0
Percentage of Target Sequences with motif92.46%
Number of Background Sequences with motif1293.5
Percentage of Background Sequences with motif75.17%
Average Position of motif in Targets3714.7 +/- 4230.4bp
Average Position of motif in Background2061.2 +/- 1992.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAAGTTCGG
NNTGCCAAGNN---
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGTTCGG
CGTGCCAAG-----
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGTTCGG
AGGTCAAGGTCA-
 A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGTTCGG
AGGCCTAG-----
 A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGTTCGG
GGTGCCAAGT----
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCCAAGTTCGG
--CAAAGGTCAG
 A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCCAAGTTCGG
-NTCAAGGTCA-
 A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCCAAGTTCGG
-BTCAAGGTCA-
 A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCCAAGTTCGG
TNCCATATATGG
 A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGTTCGG
AGGTCAAGGTCA-
 A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A G T C A C T G A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T