During startup - Warning messages: 1: Setting LC_CTYPE failed, using "C" 2: Setting LC_COLLATE failed, using "C" 3: Setting LC_TIME failed, using "C" 4: Setting LC_MESSAGES failed, using "C" 5: Setting LC_MONETARY failed, using "C" 6: Setting LC_PAPER failed, using "C" 7: Setting LC_MEASUREMENT failed, using "C" / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____| ArchR : Version 1.0.2 For more information see our website : www.ArchRProject.com If you encounter a bug please report : https://github.com/GreenleafLab/ArchR/issues Loading Required Packages... Loading Package : grid v4.2.2 Loading Package : gridExtra v2.3 Loading Package : gtools v3.9.4 Loading Package : gtable v0.3.1 Loading Package : ggplot2 v3.3.6 Loading Package : magrittr v2.0.3 Loading Package : plyr v1.8.8 Loading Package : stringr v1.5.0 Loading Package : data.table v1.14.6 Loading Package : matrixStats v0.63.0 Loading Package : S4Vectors v0.36.1 Loading Package : GenomicRanges v1.50.2 Loading Package : BiocGenerics v0.44.0 Loading Package : Matrix v1.5.3 Loading Package : Rcpp v1.0.9 Loading Package : SummarizedExperiment v1.28.0 Loading Package : rhdf5 v2.42.0 here() starts at /projects/pfenninggroup/singleCell/BICCN_mouse_CATlas_snATAC-seq Attaching package: 'here' The following object is masked from 'package:plyr': here Setting default number of Parallel threads to 8. Setting default genome to Mm10. Successfully loaded ArchRProject! / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____| Checking Inputs... ArchR logging to : ArchRLogs/ArchR-addIterativeLSI-4f0dce7e3cba-Date-2023-04-27_Time-15-51-48.log If there is an issue, please report to github with logFile! 2023-04-27 15:51:51 : Computing Total Across All Features, 0.011 mins elapsed. 2023-04-27 15:51:59 : Computing Top Features, 0.15 mins elapsed. ########### 2023-04-27 15:52:00 : Running LSI (1 of 4) on Top Features, 0.169 mins elapsed. ########### 2023-04-27 15:52:01 : Creating Partial Matrix, 0.187 mins elapsed. 2023-04-27 15:52:47 : Computing LSI, 0.944 mins elapsed. 2023-04-27 15:54:40 : Identifying Clusters, 2.839 mins elapsed. 2023-04-27 15:55:12 : Identified 12 Clusters, 3.363 mins elapsed. 2023-04-27 15:55:12 : Creating Cluster Matrix on the total Group Features, 3.366 mins elapsed. Error in (function (x) : attempt to apply non-function Error in (function (x) : attempt to apply non-function Error in (function (x) : attempt to apply non-function 2023-04-27 15:55:50 : Computing Variable Features, 3.999 mins elapsed. ########### 2023-04-27 15:55:50 : Running LSI (2 of 4) on Variable Features, 4.005 mins elapsed. ########### 2023-04-27 15:55:50 : Creating Partial Matrix, 4.006 mins elapsed. 2023-04-27 15:56:36 : Computing LSI, 4.763 mins elapsed. 2023-04-27 15:58:29 : Identifying Clusters, 6.654 mins elapsed. 2023-04-27 15:58:57 : Identified 12 Clusters, 7.111 mins elapsed. 2023-04-27 15:58:58 : Creating Cluster Matrix on the total Group Features, 7.132 mins elapsed. 2023-04-27 15:59:33 : Computing Variable Features, 7.711 mins elapsed. ########### 2023-04-27 15:59:33 : Running LSI (3 of 4) on Variable Features, 7.717 mins elapsed. ########### 2023-04-27 15:59:33 : Creating Partial Matrix, 7.717 mins elapsed. 2023-04-27 16:00:14 : Computing LSI, 8.392 mins elapsed. 2023-04-27 16:02:04 : Identifying Clusters, 10.236 mins elapsed. 2023-04-27 16:02:30 : Identified 12 Clusters, 10.668 mins elapsed. 2023-04-27 16:02:31 : Creating Cluster Matrix on the total Group Features, 10.688 mins elapsed. 2023-04-27 16:03:08 : Computing Variable Features, 11.297 mins elapsed. ########### 2023-04-27 16:03:08 : Running LSI (4 of 4) on Variable Features, 11.303 mins elapsed. ########### 2023-04-27 16:03:08 : Creating Partial Matrix, 11.304 mins elapsed. 2023-04-27 16:03:45 : Computing LSI, 11.923 mins elapsed. 2023-04-27 16:05:41 : Finished Running IterativeLSI, 13.845 mins elapsed. Saving ArchRProject... Loading ArchRProject... Successfully loaded ArchRProject! / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____| Harmony 1/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 2/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 3/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony converged after 3 iterations ArchR logging to : ArchRLogs/ArchR-addClusters-4f0dc49cfe253-Date-2023-04-27_Time-16-06-53.log If there is an issue, please report to github with logFile! 2023-04-27 16:06:54 : Running Seurats FindClusters (Stuart et al. Cell 2019), 0.003 mins elapsed. Computing nearest neighbor graph Computing SNN Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck Number of nodes: 24220 Number of edges: 780958 Running Louvain algorithm... 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Maximum modularity in 10 random starts: 0.9016 Number of communities: 20 Elapsed time: 4 seconds 2023-04-27 16:07:20 : Testing Biased Clusters, 0.435 mins elapsed. 2023-04-27 16:07:20 : Testing Outlier Clusters, 0.451 mins elapsed. 2023-04-27 16:07:20 : Assigning Cluster Names to 20 Clusters, 0.451 mins elapsed. 2023-04-27 16:07:21 : Finished addClusters, 0.454 mins elapsed. 16:07:21 UMAP embedding parameters a = 0.583 b = 1.334 16:07:21 Read 24220 rows and found 30 numeric columns 16:07:21 Using Annoy for neighbor search, n_neighbors = 30 16:07:21 Building Annoy index with metric = cosine, n_trees = 50 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:07:25 Writing NN index file to temp file /tmp/RtmpM0Dnb6/file4f0dc68daf336 16:07:25 Searching Annoy index using 16 threads, search_k = 3000 16:07:26 Annoy recall = 100% 16:07:28 Commencing smooth kNN distance calibration using 16 threads with target n_neighbors = 30 16:07:32 Initializing from normalized Laplacian + noise (using irlba) 16:07:34 Commencing optimization for 200 epochs, with 1023582 positive edges Using method 'umap' 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:08:11 Optimization finished 16:08:11 Creating temp model dir /tmp/RtmpM0Dnb6/dir4f0dc4516cc09 16:08:11 Creating dir /tmp/RtmpM0Dnb6/dir4f0dc4516cc09 16:08:13 Changing to /tmp/RtmpM0Dnb6/dir4f0dc4516cc09 16:08:13 Creating /projects/pfenninggroup/singleCell/BICCN_mouse_CATlas_snATAC-seq/data/tidy_data/ArchRProjects/BICCN_mouse_NAc_snATAC/Embeddings/Save-Uwot-UMAP-Params-HarmonyX500-4f0dc25c545ee-Date-2023-04-27_Time-16-08-11.tar ArchR logging to : ArchRLogs/ArchR-addImputeWeights-4f0dc76e86b3a-Date-2023-04-27_Time-16-08-13.log If there is an issue, please report to github with logFile! 2023-04-27 16:08:14 : Computing Impute Weights Using Magic (Cell 2018), 0 mins elapsed. Checking Inputs... ArchR logging to : ArchRLogs/ArchR-addIterativeLSI-4f0dc3548c476-Date-2023-04-27_Time-16-08-43.log If there is an issue, please report to github with logFile! 2023-04-27 16:08:45 : Computing Total Across All Features, 0.012 mins elapsed. 2023-04-27 16:08:52 : Computing Top Features, 0.144 mins elapsed. ########### 2023-04-27 16:08:55 : Running LSI (1 of 4) on Top Features, 0.184 mins elapsed. ########### 2023-04-27 16:08:56 : Creating Partial Matrix, 0.206 mins elapsed. 2023-04-27 16:09:36 : Computing LSI, 0.862 mins elapsed. 2023-04-27 16:11:55 : Identifying Clusters, 3.185 mins elapsed. 2023-04-27 16:12:21 : Identified 12 Clusters, 3.612 mins elapsed. 2023-04-27 16:12:21 : Creating Cluster Matrix on the total Group Features, 3.613 mins elapsed. 2023-04-27 16:12:59 : Computing Variable Features, 4.25 mins elapsed. ########### 2023-04-27 16:13:00 : Running LSI (2 of 4) on Variable Features, 4.27 mins elapsed. ########### 2023-04-27 16:13:00 : Creating Partial Matrix, 4.271 mins elapsed. 2023-04-27 16:13:44 : Computing LSI, 5.002 mins elapsed. 2023-04-27 16:15:33 : Identifying Clusters, 6.824 mins elapsed. 2023-04-27 16:15:59 : Identified 12 Clusters, 7.247 mins elapsed. 2023-04-27 16:16:00 : Creating Cluster Matrix on the total Group Features, 7.269 mins elapsed. 2023-04-27 16:16:39 : Computing Variable Features, 7.914 mins elapsed. ########### 2023-04-27 16:16:39 : Running LSI (3 of 4) on Variable Features, 7.92 mins elapsed. ########### 2023-04-27 16:16:39 : Creating Partial Matrix, 7.921 mins elapsed. 2023-04-27 16:17:24 : Computing LSI, 8.664 mins elapsed. 2023-04-27 16:19:15 : Identifying Clusters, 10.516 mins elapsed. 2023-04-27 16:19:39 : Identified 12 Clusters, 10.926 mins elapsed. 2023-04-27 16:19:41 : Creating Cluster Matrix on the total Group Features, 10.946 mins elapsed. 2023-04-27 16:20:25 : Computing Variable Features, 11.69 mins elapsed. ########### 2023-04-27 16:20:26 : Running LSI (4 of 4) on Variable Features, 11.71 mins elapsed. ########### 2023-04-27 16:20:26 : Creating Partial Matrix, 11.711 mins elapsed. 2023-04-27 16:21:10 : Computing LSI, 12.429 mins elapsed. 2023-04-27 16:22:57 : Finished Running IterativeLSI, 14.228 mins elapsed. Saving ArchRProject... Loading ArchRProject... Successfully loaded ArchRProject! / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____| Harmony 1/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 2/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 3/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony converged after 3 iterations ArchR logging to : ArchRLogs/ArchR-addClusters-4f0dc7a4d409a-Date-2023-04-27_Time-16-24-19.log If there is an issue, please report to github with logFile! 2023-04-27 16:24:19 : Running Seurats FindClusters (Stuart et al. Cell 2019), 0.002 mins elapsed. Computing nearest neighbor graph Computing SNN Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck Number of nodes: 24220 Number of edges: 780958 Running Louvain algorithm... 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Maximum modularity in 10 random starts: 0.9016 Number of communities: 20 Elapsed time: 5 seconds 2023-04-27 16:24:47 : Testing Biased Clusters, 0.457 mins elapsed. 2023-04-27 16:24:47 : Testing Outlier Clusters, 0.462 mins elapsed. 2023-04-27 16:24:47 : Assigning Cluster Names to 20 Clusters, 0.462 mins elapsed. 2023-04-27 16:24:47 : Finished addClusters, 0.463 mins elapsed. 16:24:47 UMAP embedding parameters a = 0.583 b = 1.334 16:24:47 Read 24220 rows and found 30 numeric columns 16:24:47 Using Annoy for neighbor search, n_neighbors = 30 16:24:47 Building Annoy index with metric = cosine, n_trees = 50 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:24:49 Writing NN index file to temp file /tmp/RtmpM0Dnb6/file4f0dc38e4d49e 16:24:49 Searching Annoy index using 16 threads, search_k = 3000 16:24:51 Annoy recall = 100% 16:24:52 Commencing smooth kNN distance calibration using 16 threads with target n_neighbors = 30 16:24:54 Initializing from normalized Laplacian + noise (using irlba) 16:24:56 Commencing optimization for 200 epochs, with 1023582 positive edges Using method 'umap' 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:25:34 Optimization finished 16:25:34 Creating temp model dir /tmp/RtmpM0Dnb6/dir4f0dc7804f9e2 16:25:34 Creating dir /tmp/RtmpM0Dnb6/dir4f0dc7804f9e2 16:25:37 Changing to /tmp/RtmpM0Dnb6/dir4f0dc7804f9e2 16:25:37 Creating /projects/pfenninggroup/singleCell/BICCN_mouse_CATlas_snATAC-seq/data/tidy_data/ArchRProjects/BICCN_mouse_NAc_snATAC/Embeddings/Save-Uwot-UMAP-Params-HarmonyX600-4f0dc577343f9-Date-2023-04-27_Time-16-25-34.tar ArchR logging to : ArchRLogs/ArchR-addImputeWeights-4f0dc2633aa20-Date-2023-04-27_Time-16-25-38.log If there is an issue, please report to github with logFile! 2023-04-27 16:25:39 : Computing Impute Weights Using Magic (Cell 2018), 0 mins elapsed. Checking Inputs... ArchR logging to : ArchRLogs/ArchR-addIterativeLSI-4f0dc434f9c5e-Date-2023-04-27_Time-16-26-10.log If there is an issue, please report to github with logFile! 2023-04-27 16:26:12 : Computing Total Across All Features, 0.021 mins elapsed. 2023-04-27 16:26:18 : Computing Top Features, 0.118 mins elapsed. ########### 2023-04-27 16:26:21 : Running LSI (1 of 4) on Top Features, 0.171 mins elapsed. ########### 2023-04-27 16:26:22 : Creating Partial Matrix, 0.182 mins elapsed. 2023-04-27 16:27:08 : Computing LSI, 0.962 mins elapsed. 2023-04-27 16:29:44 : Identifying Clusters, 3.56 mins elapsed. 2023-04-27 16:30:09 : Identified 14 Clusters, 3.978 mins elapsed. 2023-04-27 16:30:09 : Creating Cluster Matrix on the total Group Features, 3.978 mins elapsed. 2023-04-27 16:30:52 : Computing Variable Features, 4.687 mins elapsed. ########### 2023-04-27 16:30:52 : Running LSI (2 of 4) on Variable Features, 4.694 mins elapsed. ########### 2023-04-27 16:30:52 : Creating Partial Matrix, 4.695 mins elapsed. 2023-04-27 16:31:34 : Computing LSI, 5.392 mins elapsed. 2023-04-27 16:33:26 : Identifying Clusters, 7.255 mins elapsed. 2023-04-27 16:33:51 : Identified 12 Clusters, 7.675 mins elapsed. 2023-04-27 16:33:52 : Creating Cluster Matrix on the total Group Features, 7.695 mins elapsed. 2023-04-27 16:34:40 : Computing Variable Features, 8.496 mins elapsed. ########### 2023-04-27 16:34:41 : Running LSI (3 of 4) on Variable Features, 8.502 mins elapsed. ########### 2023-04-27 16:34:41 : Creating Partial Matrix, 8.503 mins elapsed. 2023-04-27 16:35:23 : Computing LSI, 9.205 mins elapsed. 2023-04-27 16:37:18 : Identifying Clusters, 11.126 mins elapsed. 2023-04-27 16:37:44 : Identified 12 Clusters, 11.56 mins elapsed. 2023-04-27 16:37:46 : Creating Cluster Matrix on the total Group Features, 11.582 mins elapsed. 2023-04-27 16:38:20 : Computing Variable Features, 12.162 mins elapsed. ########### 2023-04-27 16:38:21 : Running LSI (4 of 4) on Variable Features, 12.169 mins elapsed. ########### 2023-04-27 16:38:21 : Creating Partial Matrix, 12.17 mins elapsed. 2023-04-27 16:39:08 : Computing LSI, 12.956 mins elapsed. 2023-04-27 16:40:59 : Finished Running IterativeLSI, 14.799 mins elapsed. Saving ArchRProject... Loading ArchRProject... Successfully loaded ArchRProject! / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____| Harmony 1/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 2/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony 3/10 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Harmony converged after 3 iterations ArchR logging to : ArchRLogs/ArchR-addClusters-4f0dc3515c374-Date-2023-04-27_Time-16-42-29.log If there is an issue, please report to github with logFile! 2023-04-27 16:42:29 : Running Seurats FindClusters (Stuart et al. Cell 2019), 0.002 mins elapsed. Computing nearest neighbor graph Computing SNN Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck Number of nodes: 24220 Number of edges: 780958 Running Louvain algorithm... 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Maximum modularity in 10 random starts: 0.9016 Number of communities: 20 Elapsed time: 5 seconds 2023-04-27 16:42:54 : Testing Biased Clusters, 0.409 mins elapsed. 2023-04-27 16:42:54 : Testing Outlier Clusters, 0.411 mins elapsed. 2023-04-27 16:42:54 : Assigning Cluster Names to 20 Clusters, 0.411 mins elapsed. 2023-04-27 16:42:54 : Finished addClusters, 0.413 mins elapsed. 16:42:54 UMAP embedding parameters a = 0.583 b = 1.334 16:42:54 Read 24220 rows and found 30 numeric columns 16:42:54 Using Annoy for neighbor search, n_neighbors = 30 16:42:54 Building Annoy index with metric = cosine, n_trees = 50 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:42:57 Writing NN index file to temp file /tmp/RtmpM0Dnb6/file4f0dc47762b9c 16:42:57 Searching Annoy index using 16 threads, search_k = 3000 16:42:59 Annoy recall = 100% 16:43:00 Commencing smooth kNN distance calibration using 16 threads with target n_neighbors = 30 16:43:01 Initializing from normalized Laplacian + noise (using irlba) 16:43:03 Commencing optimization for 200 epochs, with 1023582 positive edges Using method 'umap' 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 16:43:40 Optimization finished 16:43:41 Creating temp model dir /tmp/RtmpM0Dnb6/dir4f0dc7c2d491e 16:43:41 Creating dir /tmp/RtmpM0Dnb6/dir4f0dc7c2d491e 16:43:43 Changing to /tmp/RtmpM0Dnb6/dir4f0dc7c2d491e 16:43:43 Creating /projects/pfenninggroup/singleCell/BICCN_mouse_CATlas_snATAC-seq/data/tidy_data/ArchRProjects/BICCN_mouse_NAc_snATAC/Embeddings/Save-Uwot-UMAP-Params-HarmonyX700-4f0dc1c09cbdd-Date-2023-04-27_Time-16-43-41.tar ArchR logging to : ArchRLogs/ArchR-addImputeWeights-4f0dc79e6ab5c-Date-2023-04-27_Time-16-43-45.log If there is an issue, please report to github with logFile! 2023-04-27 16:43:46 : Computing Impute Weights Using Magic (Cell 2018), 0 mins elapsed. Saving ArchRProject... Loading ArchRProject... Successfully loaded ArchRProject! / | / \ . / |. \\\ / |. \\\ / `|. \\\ / |. \ / |\ \\#####\ / || ==###########> / || \\##==......\ / || ______ = =|__ /__ || \\\ ,--' ,----`-,__ ___/' --,-`-===================##========> \ ' ##_______ _____ ,--,__,=##,__ /// , __== ___,-,__,--'#' ===' `-' | ##,-/ -,____,---' \\####\\________________,--\\_##,/ ___ .______ ______ __ __ .______ / \ | _ \ / || | | | | _ \ / ^ \ | |_) | | ,----'| |__| | | |_) | / /_\ \ | / | | | __ | | / / _____ \ | |\ \\___ | `----.| | | | | |\ \\___. /__/ \__\ | _| `._____| \______||__| |__| | _| `._____|