/home/bnphan/src/STAR-2.7.9a/bin/Linux_x86_64/STAR --outTmpDir /scratch/bnphan/Saline_F_S5/tmp --outFileNamePrefix Saline_F_S5. --soloType Droplet --readFilesCommand zcat --readFilesIn SRR23021853_3.fastq.gz,SRR23021854_3.fastq.gz,SRR23021855_3.fastq.gz,SRR23021856_3.fastq.gz SRR23021853_2.fastq.gz,SRR23021854_2.fastq.gz,SRR23021855_2.fastq.gz,SRR23021856_2.fastq.gz --genomeDir /projects/pfenninggroup/machineLearningForComputationalBiology/resources/genomes/rn7 --limitOutSJcollapsed 5000000 --runThreadN 24 --soloCBwhitelist /home/bnphan/src/STAR-2.7.9a/3M-february-2018.txt --soloFeatures GeneFull Gene --soloBarcodeReadLength 0 --soloCBmatchWLtype 1MM --soloCellFilter EmptyDrops_CR --soloMultiMappers EM --soloUMIlen 12 --soloUMIdedup 1MM_CR --outSAMtype None STAR version: 2.7.9a compiled: 2021-05-04T09:43:56-0400 vega:/home/dobin/data/STAR/STARcode/STAR.master/source Mar 13 14:52:21 ..... started STAR run Mar 13 14:52:49 ..... loading genome Mar 13 14:56:45 ..... started mapping Mar 13 15:13:50 ..... finished mapping Mar 13 15:13:54 ..... started Solo counting Mar 13 15:16:07 ..... finished Solo counting Mar 13 15:16:07 ..... finished successfully