/home/bnphan/src/STAR-2.7.9a/bin/Linux_x86_64/STAR --outTmpDir /scratch/bnphan/Cocaine_M_S8/tmp --outFileNamePrefix Cocaine_M_S8. --soloType Droplet --readFilesCommand zcat --readFilesIn SRR23021853_3.fastq.gz,SRR23021854_3.fastq.gz,SRR23021855_3.fastq.gz,SRR23021856_3.fastq.gz SRR23021853_2.fastq.gz,SRR23021854_2.fastq.gz,SRR23021855_2.fastq.gz,SRR23021856_2.fastq.gz --genomeDir /projects/pfenninggroup/machineLearningForComputationalBiology/resources/genomes/rn7 --limitOutSJcollapsed 5000000 --runThreadN 24 --soloCBwhitelist /home/bnphan/src/STAR-2.7.9a/3M-february-2018.txt --soloFeatures GeneFull Gene --soloBarcodeReadLength 0 --soloCBmatchWLtype 1MM --soloCellFilter EmptyDrops_CR --soloMultiMappers EM --soloUMIlen 12 --soloUMIdedup 1MM_CR --outSAMtype None
	STAR version: 2.7.9a   compiled: 2021-05-04T09:43:56-0400 vega:/home/dobin/data/STAR/STARcode/STAR.master/source
Mar 12 19:17:51 ..... started STAR run
Mar 12 19:17:53 ..... loading genome
Mar 12 19:19:03 ..... started mapping
Mar 12 19:37:24 ..... finished mapping
Mar 12 19:37:27 ..... started Solo counting
Mar 12 19:39:19 ..... finished Solo counting
Mar 12 19:39:21 ..... finished successfully
rm: cannot remove ‘Cocaine_M_S8*.fastq.gz’: No such file or directory